Package: ADMUR 1.0.3.9005
Adrian Timpson
ADMUR: Ancient Demographic Modelling Using Radiocarbon
Statistical tools to directly model underlying population dynamics using date datasets (radiocarbon and other). Various model structures can be tested including Continuous Piecewise Linear (CPL) models that are flexible to estimate any complex population dynamics, Uniform, Exponential, Gaussian, Cauchy, Sinusoidal, Logistic and Power law. Bayesian parameter estimates of population models. Taphonomic loss included optionally as a power function. Model comparison framework using BIC. Package also calibrates 14C samples, generates Summed Probability Distributions (SPD), and performs SPD simulation analysis to generate a Goodness-of-fit test for the best selected model. Details about the method can be found in Timpson A., Barberena R., Thomas M. G., Mendez C., Manning K. (2020) <https://royalsocietypublishing.org/doi/10.1098/rstb.2019.0723>.
Authors:
ADMUR_1.0.3.9005.tar.gz
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ADMUR.pdf |ADMUR.html✨
ADMUR/json (API)
NEWS
| # Install 'ADMUR' in R: |
| install.packages('ADMUR', repos = c('https://ucl.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ucl/admur/issues
- SAAD - Radiocarbon dataset for South American Arid Diagonal
- bluhm2421 - Radiocarbon dataset from Bluhm and Surovell 2018
- bryson1848 - Radiocarbon dataset from Bryson et al. 2006
- data1 - Toy radiocarbon dataset
- data2 - Toy radiocarbon dataset
- data3 - Toy radiocarbon dataset
- data4 - Toy radiocarbon dataset
- intcal13 - Northern hemisphere 2013 calibration curve
- intcal20 - Northern hemisphere 2020 calibration curve
- shcal13 - Southern hemisphere 2013 calibration curve
- shcal20 - Southern hemisphere 2020 calibration curve
- toy - Toy population model
Last updated 1 years agofrom:838f661049. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 12 2024 |
| R-4.5-win | OK | Nov 12 2024 |
| R-4.5-linux | OK | Nov 12 2024 |
| R-4.4-win | OK | Nov 12 2024 |
| R-4.4-mac | OK | Nov 12 2024 |
| R-4.3-win | OK | Nov 12 2024 |
| R-4.3-mac | OK | Nov 12 2024 |
Exports:checkDataconvertParsCPLparsToHingesestimateDataDomaingetModelChoicesloglikmakeCalArraymcmcobjectiveFunctionphaseCalibratorplotCalArrayplotPDplotSimulationSummaryrelativeRaterollmeansimulateCalendarDatesSPDsimulationTestsummedCalibratorsummedCalibratorWrappersummedPhaseCalibratoruncalibrateCalendarDates
Dependencies:mathjaxr
{width=680px} ADMUR: Ancient Demographic Modelling Using Radiocarbon
Rendered fromguide.Rmdusingknitr::rmarkdownon Nov 12 2024.Last update: 2023-09-11
Started: 2020-07-08
{height=0.5in} Replicating published results
Rendered fromreplicating-timpson-rstb.2020.Rmdusingknitr::rmarkdownon Nov 12 2024.Last update: 2023-09-11
Started: 2020-11-04
